Palmer's Penguins

Penguins at the Palmer Station Antarctica Long-Term Ecological Research site

Research stations in Antarctica

The Palmer Penguins data contains size measurements, clutch observations, and blood isotope ratios for 344 Penguins of 3 penguin species observed on three islands in the Palmer Archipelago, Antarctica over a study period of three years. The palmerpenguins data is commonly used when introducing students to new data science concepts.

The canonical paper from Gorman et al. presents the research in detail. Palmer's Penguins is an alternative to the Iris sample dataset.

Meet the penguins

The Palmer Archipelago penguins. Artwork by @allison_horst.

The data contains three penguin species and includes measurements of bill length, bill depth, flipper length and body mass.

These data were collected from 2007 - 2009 by Dr. Kristen Gorman with the Palmer Station Long Term Ecological Research Program, part of the US Long Term Ecological Research Network. The data were imported directly from the Environmental Data Initiative (EDI) Data Portal, and are available for use by CC0 license (“No Rights Reserved”) in accordance with the Palmer Station Data Policy.Inset clarifying that in the raw data, bill dimensions are recorded as 'culmen length' and 'culmen depth'. The culmen is the dorsal ridge atop the bill.

At the Palmer Station, three species of Penguins were measured on various structural aspects like body mass, bill Length, bill depth and flipper length. PAL scientists have documented an 85 percent reduction in Adélie penguin populations along the western Antarctic Peninsula since 1974.

Penguins by Island

Source: Environmental Data Initiative

The penguins were studied on three islands: Biscoe, Dream, and Torgersen.

Bill Length vs. Body Mass

Source: Structural size measurements and isotopic signatures

Bill Length vs. Bill Depth

Source: Structural size measurements and isotopic signatures
 
Produced by Lauren Lipuma for the U.S. Antarctic Program. This animation shows how the populations of Adélie, Chinstrap, and Gentoo penguins around Anvers Island have changed from 1980 to 2020. One penguin represents 500 breeding pairs. Data courtesy of Bill Fraser. Numbers of penguins are estimates.

Penguin species

Source: Environmental Data Initiative

Simpson's Paradox

If you measure the relationship between culmen depth and length in a mixed population of penguins, it is positively correlated in each of the three species (bigger penguins with the longer culmens also tend to have the deeper ones); however, the Gentoo population has a smaller aspect ratio of depth against length, and the overall correlation across the three species is negative. This is called Simpson’s paradox, and it applies to any data that contains underlying populations with different properties or outcomes.

Source: Environmental Data Initiative

Two king penguins face each other on a sandy beach near the ocean.

References

Individual data can be accessed directly via the Environmental Data Initiative:

3 study sites on a map of Antarctic Peninsula